PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14656
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 257aa    MW: 27751.9 Da    PI: 8.9814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14656genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20110160255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f taeeAa a+++a+ +++g
  PEQU_14656 110 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEEAALAYDRAAYRMRG 160
                 8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.11E-30109168No hitNo description
Gene3DG3DSA:3.30.730.105.1E-32109168IPR001471AP2/ERF domain
PROSITE profilePS5103224.711110168IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-23110170IPR016177DNA-binding domain
SMARTSM003807.4E-38110174IPR001471AP2/ERF domain
PfamPF008471.7E-14110160IPR001471AP2/ERF domain
PRINTSPR003673.6E-11111122IPR001471AP2/ERF domain
PRINTSPR003673.6E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
IAKPKMHNTT LDAIRHHLLD DPEVPSSAAT SPSPPTYLRT SSFGRFVADH WIDLPFRPDD  60
SDDMVVYLAL HDAFSNGWIP ALPCSGGAVQ SPLEKPNSPD PETPPEKEKH YRGVRRRPWG  120
KFAAEIRDPA KNGARVWLGT FETAEEAALA YDRAAYRMRG SRALLNFPLR IGSENGAGES  180
PAKRAISVSS PSSSSSSSSN SFSSSSLSSQ STTSVKRRRR GQAAALSVGP DSPAAVYSPA  240
PVPVQFPAQW HPDEMSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-38107173268ATERF1
3gcc_A3e-38107173268ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008813598.12e-67PREDICTED: ethylene-responsive transcription factor 2
SwissprotO803377e-53EF100_ARATH; Ethylene-responsive transcription factor 1A
SwissprotQ9LW504e-53ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLM0T0D45e-71M0T0D4_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P21050_0011e-70(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-39ethylene responsive element binding factor 1